//Property: name
"name": "R script to compare several conditions with the SARTools and DESeq2 packages"

//Property: abstract
"abstract": "An R script for differential gene expression analysis using SARTools and DESeq2 packages. It processes RNA-seq count data, performs statistical comparisons between biological conditions, generates quality control plots, identifies differentially expressed genes, and produces an HTML report with visualization outputs."

//Property: author
"author":  [
  {
    "@type": "Person",
    "name": "Elise JACQUEMET"
  },{ 
    "@type": "Person",
    "name": "Charlotte BERTHELLIER"
  },{ 
    "@type": "Person",
    "name": "Hugo VARET"
  }
]

//Property: description
"description": "An R script for differential gene expression analysis using SARTools and DESeq2 packages. It processes RNA-seq count data, performs statistical comparisons between biological conditions, generates quality control plots, identifies differentially expressed genes, and produces an HTML report with visualization outputs."

//Property: audience
"audience": {
    "@type": "Audience",
    "audienceType": "beginner in high-throughput sequencing data analysis, starting at graduate level" 
}

//Property: educationalLevel
"educationalLevel": "Beginner"

//Property: inLanguage
"inLanguage": ["en-US"]
  
//Property: teaches
"teaches": [
    "The student will be able to configure and execute a DESeq2 differential expression analysis pipeline",
    "The student will be able to filter and normalize RNA-seq count data using appropriate preprocessing steps",
    "The student will be able to perform exploratory data analysis including PCA and clustering on transcriptomic data",
    "The student will be able to identify differentially expressed genes using statistical thresholds (p-value, fold change)",
    "The student will be able to compare gene lists across multiple conditions and extract condition-specific signatures"
]

//Property: keywords
"keywords": "RNA-seq, differential expression, DESeq2, SARTools, transcriptomics"

//Property: learningResourceType (presentation or handout)
"learningResourceType": ["handout"]

//Property: license
// "https://creativecommons.org/licenses/by-sa/4.0/"
// "https://mit-license.org/"
"license": ["https://creativecommons.org/licenses/by-sa/4.0/"]

//Property: dateModified
"dateModified": "2025-11-17T0:00:00+00:00"